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ProteinShake documentation
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ProteinShake documentation

Notes

  • Installation
  • Quickstart
  • Overview
  • Working with datasets
  • Working with tasks
  • Custom datasets and tasks
  • How to contribute
  • Leaderboard submission
  • Citation

Package Reference

  • datasets
  • tasks
  • representations
  • transforms
  • frameworks
  • utils
ProteinShake documentation
/
Overview: module code

All modules for which code is available

  • proteinshake.datasets.alphafold
  • proteinshake.datasets.dataset
  • proteinshake.datasets.enzyme_commission
  • proteinshake.datasets.gene_ontology
  • proteinshake.datasets.protein_family
  • proteinshake.datasets.protein_ligand_decoys
  • proteinshake.datasets.protein_ligand_interface
  • proteinshake.datasets.protein_protein_interface
  • proteinshake.datasets.rcsb
  • proteinshake.datasets.scop
  • proteinshake.datasets.tm_align
  • proteinshake.frameworks.dataset
  • proteinshake.frameworks.dgl
  • proteinshake.frameworks.np
  • proteinshake.frameworks.nx
  • proteinshake.frameworks.pyg
  • proteinshake.frameworks.tf
  • proteinshake.frameworks.torch
  • proteinshake.representations.graph
  • proteinshake.representations.point
  • proteinshake.representations.voxel
  • proteinshake.tasks.binding_site_detection
  • proteinshake.tasks.enzyme_class
  • proteinshake.tasks.gene_ontology
  • proteinshake.tasks.ligand_affinity
  • proteinshake.tasks.pfam_task
  • proteinshake.tasks.protein_protein_interface
  • proteinshake.tasks.structural_class
  • proteinshake.tasks.structure_search
  • proteinshake.tasks.structure_similarity
  • proteinshake.tasks.task
  • proteinshake.tasks.virtual_screen
  • proteinshake.transforms.coords
  • proteinshake.transforms.transforms
  • proteinshake.utils.embeddings
  • proteinshake.utils.io

© 2023, Tim Kucera, Carlos Oliver, Dexiong Chen, Karsten Borgwardt Built with Sphinx 5.3.0